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  5. LOC_Os04g55850.1

LOC_Os04g55850.1


Description : Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 393.3) & Endonuclease 2 OS=Arabidopsis thaliana (sp|q9c9g4|endo2_arath : 305.0)


Gene families : OG0001168 (Archaeplastida) Phylogenetic Tree(s): OG0001168_tree ,
OG_05_0001313 (LandPlants) Phylogenetic Tree(s): OG_05_0001313_tree ,
OG_06_0001292 (SeedPlants) Phylogenetic Tree(s): OG_06_0001292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g55850.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
MA_158988g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.05 Archaeplastida
Zm00001e025725_P001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004519 endonuclease activity IEA Interproscan
BP GO:0006308 DNA catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 27 283
No external refs found!