LOC_Os04g56300.1

Description : component ADA1 of SAGA transcription co-activator complex

Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree ,
OG_06_0004777 (SeedPlants) Phylogenetic Tree(s): OG_06_0004777_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g56300.1
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000704.27	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.01	Archaeplastida
GSVIVT01035521001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.03	Archaeplastida
GSVIVT01037861001	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.04	Archaeplastida
Gb_32111	No alias	component ADA1 of SAGA transcription co-activator complex	0.05	Archaeplastida
LOC_Os12g39090.2	No alias	component ADA1 of SAGA transcription co-activator complex	0.05	Archaeplastida
MA_7243g0030	No alias	component ADA1 of SAGA transcription co-activator complex	0.02	Archaeplastida
Mp5g08050.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.02	Archaeplastida
Pp3c3_34380V3.1	No alias	No annotation	0.02	Archaeplastida
Solyc01g107210.4.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.03	Archaeplastida
Solyc06g068610.3.1	No alias	component ADA1 of SAGA transcription co-activator complex	0.02	Archaeplastida
Zm00001e006681_P001	No alias	component ADA1 of SAGA transcription co-activator complex	0.03	Archaeplastida
Zm00001e041823_P001	No alias	component ADA1 of SAGA transcription co-activator complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044451	nucleoplasm part	None	Extended
CC	GO:0044464	cell part	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	32	338

External Links

No external refs found!