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  5. LOC_Os04g56780.1

LOC_Os04g56780.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g56780.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.07 Archaeplastida
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.05 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.07 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.02 Archaeplastida
MA_74653g0010 No alias transcription factor (WOX) 0.04 Archaeplastida
Solyc02g077390.2.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.06 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.08 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.06 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 34 94
No external refs found!