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  5. LOC_Os04g57530.1

LOC_Os04g57530.1


Description : no hits & (original description: none)


Gene families : OG0000269 (Archaeplastida) Phylogenetic Tree(s): OG0000269_tree ,
OG_05_0001686 (LandPlants) Phylogenetic Tree(s): OG_05_0001686_tree ,
OG_06_0003415 (SeedPlants) Phylogenetic Tree(s): OG_06_0003415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g57530.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00016810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G31310 No alias hydroxyproline-rich glycoprotein family protein 0.07 Archaeplastida
GSVIVT01026222001 No alias No description available 0.09 Archaeplastida
MA_174370g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_174370g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp6g15470.1 No alias Trihelix transcription factor ASR3 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c7_23130V3.1 No alias hydroxyproline-rich glycoprotein family protein 0.02 Archaeplastida
Solyc02g030460.2.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc02g069390.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e006592_P002 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e012318_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!