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Description : C3H zinc finger transcription factor. regulatory component ZC11A of TREX/THO mRNP trafficking complex
Gene families : OG0003012 (Archaeplastida) Phylogenetic Tree(s): OG0003012_tree ,
OG_05_0002239 (LandPlants) Phylogenetic Tree(s): OG_05_0002239_tree ,
OG_06_0002393 (SeedPlants) Phylogenetic Tree(s): OG_06_0002393_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g57600.1 | |
| Cluster | HCCA: Cluster_211 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G02160 | No alias | CCCH-type zinc finger family protein | 0.02 | Archaeplastida | |
| GSVIVT01010243001 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.04 | Archaeplastida | |
| MA_17019g0010 | No alias | C3H zinc finger transcription factor | 0.02 | Archaeplastida | |
| Smo441325 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.02 | Archaeplastida | |
| Zm00001e023520_P001 | No alias | C3H zinc finger transcription factor. regulatory... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| CC | GO:0005681 | spliceosomal complex | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008289 | lipid binding | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| BP | GO:0035556 | intracellular signal transduction | IEP | Neighborhood |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |