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  5. LOC_Os04g58850.1

LOC_Os04g58850.1


Description : NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana (sp|q9srn1|nhl2_arath : 110.0)


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0000194 (SeedPlants) Phylogenetic Tree(s): OG_06_0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g58850.1
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00244400 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00010p00185810 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00030p00210920 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00030p00214230 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00030p00215650 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.12 Archaeplastida
AMTR_s00030p00216100 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.12 Archaeplastida
AMTR_s00101p00083450 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.12 Archaeplastida
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.05 Archaeplastida
AT2G27260 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT3G11660 NHL1 NDR1/HIN1-like 1 0.02 Archaeplastida
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Archaeplastida
AT5G06320 NHL3 NDR1/HIN1-like 3 0.09 Archaeplastida
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_00037 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_01970 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_04457 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_26587 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_26589 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_26590 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_27157 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10432342g0010 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
MA_14231g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_313447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_34155g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_3652531g0010 No alias No annotation 0.02 Archaeplastida
MA_372310g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44394g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_86810g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp3g02160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g19340.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c10_5660V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.04 Archaeplastida
Pp3c13_23080V3.1 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
Pp3c23_11590V3.1 No alias NDR1/HIN1-like 2 0.03 Archaeplastida
Pp3c4_22140V3.1 No alias NDR1/HIN1-like 25 0.03 Archaeplastida
Solyc01g007220.4.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g009160.2.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc02g036480.1.1 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g121620.1.1 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc10g081970.2.1 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc10g081980.2.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Solyc10g150145.1.1 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e004504_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e012610_P001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e014749_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019181_P001 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e020501_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e025983_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027782_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e028673_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031411_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e039222_P001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e041974_P001 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 81 170
No external refs found!