LOC_Os04g59470.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0066333 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g59470.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00007p00063550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00022p00094930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00044p00058960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00099p00163300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00119p00026870	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00119p00040230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT1G61110	NAC025, anac025	NAC domain containing protein 25	0.03	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.02	Archaeplastida
AT3G12910	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G15510	NARS1, NAC2,...	NAC domain containing protein 2	0.02	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.02	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.03	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.03	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.05	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01020384001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01023921001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01028354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.01	Archaeplastida
GSVIVT01033032001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Gb_04998	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_13930	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_18916	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_38935	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_40805	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g04070.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g21060.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os06g51070.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os12g29330.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_10434668g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_10436448g0010	No alias	transcription factor (NAC)	0.01	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_15204g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_183543g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_1948g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.07	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_98483g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02670.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.02	Archaeplastida
Pp3c26_13950V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c4_11490V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c4_29470V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c5_630V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.01	Archaeplastida
Smo71404	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Smo74001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Solyc01g102740.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc07g066330.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc08g006020.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g017470.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e004117_P001	No alias	transcription factor (NAC)	0.01	Archaeplastida
Zm00001e004141_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e008026_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009384_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e013320_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e023635_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e029404_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e030150_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e033142_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e035884_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e037088_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e037804_P001	No alias	transcription factor (NAC)	0.01	Archaeplastida
Zm00001e039557_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006099	tricarboxylic acid cycle	IEP	Neighborhood
BP	GO:0006101	citrate metabolic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008272	sulfate transport	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0009690	cytokinin metabolic process	IEP	Neighborhood
BP	GO:0010817	regulation of hormone levels	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015977	carbon fixation	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
BP	GO:0016999	antibiotic metabolic process	IEP	Neighborhood
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
BP	GO:0034754	cellular hormone metabolic process	IEP	Neighborhood
BP	GO:0042445	hormone metabolic process	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0072348	sulfur compound transport	IEP	Neighborhood
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Neighborhood
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	10	143

External Links

No external refs found!

LOC_Os04g59470.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation