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  5. LOC_Os05g02900.1

LOC_Os05g02900.1


Description : no hits & (original description: none)


Gene families : OG0007123 (Archaeplastida) Phylogenetic Tree(s): OG0007123_tree ,
OG_05_0005110 (LandPlants) Phylogenetic Tree(s): OG_05_0005110_tree ,
OG_06_0003190 (SeedPlants) Phylogenetic Tree(s): OG_06_0003190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g02900.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00232170 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT5G02640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 Archaeplastida
Zm00001e029547_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!