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  5. LOC_Os05g04360.1

LOC_Os05g04360.1


Description : transcription factor (DBP)


Gene families : OG0000802 (Archaeplastida) Phylogenetic Tree(s): OG0000802_tree ,
OG_05_0009795 (LandPlants) Phylogenetic Tree(s): OG_05_0009795_tree ,
OG_06_0007014 (SeedPlants) Phylogenetic Tree(s): OG_06_0007014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g04360.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013399001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
GSVIVT01017639001 No alias RNA biosynthesis.transcriptional activation.DBP... 0.06 Archaeplastida
MA_13571g0010 No alias transcription factor (DBP). clade G phosphatase 0.03 Archaeplastida
MA_19098g0010 No alias transcription factor (DBP) 0.02 Archaeplastida
Pp3c1_24090V3.1 No alias Protein phosphatase 2C family protein 0.02 Archaeplastida
Pp3c2_10660V3.1 No alias Protein phosphatase 2C family protein 0.02 Archaeplastida
Pp3c6_3580V3.1 No alias DNA-binding protein phosphatase 1 0.02 Archaeplastida
Solyc04g082600.3.1 No alias transcription factor (DBP). clade G phosphatase 0.03 Archaeplastida
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Zm00001e025432_P001 No alias transcription factor (DBP) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 86 338
No external refs found!