1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g04430.1

LOC_Os05g04430.1


Description : no hits & (original description: none)


Gene families : OG0000098 (Archaeplastida) Phylogenetic Tree(s): OG0000098_tree ,
OG_05_0000033 (LandPlants) Phylogenetic Tree(s): OG_05_0000033_tree ,
OG_06_0000010 (SeedPlants) Phylogenetic Tree(s): OG_06_0000010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g04430.1
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g06200.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g15190.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g19660.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os01g29370.1 No alias no hits & (original description: none) 0.22 Archaeplastida
LOC_Os01g35080.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os01g35470.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g41500.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os01g66450.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os02g20070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25140.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g25440.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os02g27630.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os02g33260.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os02g35280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g49890.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g03220.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os03g03240.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os03g04790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g29660.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g31640.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os03g33290.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g36120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g01190.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g02200.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g03950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g05310.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g05680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g09710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g10190.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os04g13020.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g14870.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g17720.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g19910.1 No alias no hits & (original description: none) 0.2 Archaeplastida
LOC_Os04g21380.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os04g23780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g24080.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g24390.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g28900.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g29660.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g43480.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g53270.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g17040.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g17870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g17970.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g18910.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g20370.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os05g20820.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g23280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g24840.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g24950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g28560.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os05g31430.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os05g32040.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g14600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g22790.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os06g23080.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os06g27950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g29060.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os06g29750.1 No alias no hits & (original description: none) 0.15 Archaeplastida
LOC_Os06g33260.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g35380.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os06g36140.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g45530.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g47370.1 No alias no hits & (original description: none) 0.18 Archaeplastida
LOC_Os06g48460.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os07g07830.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g11230.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g13690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g14950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g14970.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g18200.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g20690.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os07g25080.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os07g26800.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g27820.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g44520.1 No alias no hits & (original description: none) 0.19 Archaeplastida
LOC_Os07g45660.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g45710.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g07230.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os08g10180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g12400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g13500.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os08g13560.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g19460.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g27300.1 No alias no hits & (original description: none) 0.18 Archaeplastida
LOC_Os08g33250.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g01350.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os09g04540.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os09g07250.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g07690.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os09g08240.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g09800.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g10080.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g11030.1 No alias no hits & (original description: none) 0.18 Archaeplastida
LOC_Os09g11950.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g14740.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g15140.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os09g16690.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g22350.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os10g07598.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g11930.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g12280.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g17230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g22260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g26930.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g40160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g07720.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g15100.1 No alias no hits & (original description: none) 0.18 Archaeplastida
LOC_Os11g22020.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os11g22690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g22710.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os11g23090.1 No alias no hits & (original description: none) 0.16 Archaeplastida
LOC_Os11g24920.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os11g28560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g28790.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g29450.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g33060.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os11g35690.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g05500.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g09870.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g16820.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g16960.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g20350.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g23010.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g23540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g23640.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g26740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g27700.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g28280.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g28340.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g31180.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33890.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g43280.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR010685 DUF1263 645 682
No external refs found!