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  2. SpeciesLOC_Os12g11600.1
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g05930.1

LOC_Os05g05930.1


Description : TSPO autophagosome autophagic adapter protein


Gene families : OG0003242 (Archaeplastida) Phylogenetic Tree(s): OG0003242_tree ,
OG_05_0004213 (LandPlants) Phylogenetic Tree(s): OG_05_0004213_tree ,
OG_06_0009852 (SeedPlants) Phylogenetic Tree(s): OG_06_0009852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g05930.1
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT2G47770 ATTSPO, TSPO TSPO(outer membrane tryptophan-rich sensory protein)-related 0.01 Archaeplastida
Mp3g12180.1 No alias TSPO autophagosome autophagic adapter protein 0.06 Archaeplastida
Pp3c10_6760V3.1 No alias TSPO(outer membrane tryptophan-rich sensory protein)-related 0.05 Archaeplastida
Pp3c2_17540V3.1 No alias TSPO(outer membrane tryptophan-rich sensory protein)-related 0.04 Archaeplastida
Smo88870 No alias Vesicle trafficking.autophagosome formation.cargo... 0.04 Archaeplastida
Solyc09g074910.1.1 No alias TSPO autophagosome autophagic adapter protein 0.08 Archaeplastida
Zm00001e027500_P001 No alias TSPO autophagosome autophagic adapter protein 0.26 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR004307 TspO_MBR 96 192
No external refs found!