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  5. LOC_Os05g06470.1

LOC_Os05g06470.1


Description : regulatory component PP4R3 of PP4 phosphatase complex


Gene families : OG0001905 (Archaeplastida) Phylogenetic Tree(s): OG0001905_tree ,
OG_05_0002212 (LandPlants) Phylogenetic Tree(s): OG_05_0002212_tree ,
OG_06_0003923 (SeedPlants) Phylogenetic Tree(s): OG_06_0003923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g06470.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AT3G06670 No alias binding 0.03 Archaeplastida
Cpa|evm.model.tig00001408.7 No alias Protein modification.dephosphorylation.serine/threonine... 0.02 Archaeplastida
GSVIVT01035021001 No alias Protein modification.dephosphorylation.serine/threonine... 0.04 Archaeplastida
MA_10695g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g09510.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.02 Archaeplastida
Pp3c12_11410V3.1 No alias binding 0.04 Archaeplastida
Pp3c26_3230V3.1 No alias binding 0.03 Archaeplastida
Pp3c4_23450V3.1 No alias binding 0.04 Archaeplastida
Smo416323 No alias Protein modification.dephosphorylation.serine/threonine... 0.05 Archaeplastida
Solyc01g060080.4.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.03 Archaeplastida
Solyc12g099320.2.1 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.03 Archaeplastida
Zm00001e017588_P001 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.05 Archaeplastida
Zm00001e026266_P001 No alias regulatory component PP4R3 of PP4 phosphatase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006887 DUF625 181 312
No external refs found!