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  5. LOC_Os05g07060.1

LOC_Os05g07060.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g07060.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.06 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.05 Archaeplastida
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.02 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.12 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.13 Archaeplastida
GSVIVT01020616001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.1 Archaeplastida
GSVIVT01025662001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.09 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os05g48890.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os09g30486.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
MA_59950g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.1 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e024743_P001 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Zm00001e027481_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 63 200
No external refs found!