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  5. LOC_Os05g08660.1

LOC_Os05g08660.1


Description : no hits & (original description: none)


Gene families : OG0001754 (Archaeplastida) Phylogenetic Tree(s): OG0001754_tree ,
OG_05_0001129 (LandPlants) Phylogenetic Tree(s): OG_05_0001129_tree ,
OG_06_0000591 (SeedPlants) Phylogenetic Tree(s): OG_06_0000591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g08660.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.52 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os01g31010.1 No alias no hits & (original description: none) 0.14 Archaeplastida
LOC_Os02g21980.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os03g31542.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os03g45734.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os03g56040.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g17789.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os04g34880.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g21410.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g30050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os10g24920.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g23200.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g27100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g21470.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g21980.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 157 246
No external refs found!