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  5. AMTR_s00006p00130300

AMTR_s00006p00130300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.48

Description : Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX-type)


Gene families : OG0000030 (Archaeplastida) Phylogenetic Tree(s): OG0000030_tree ,
OG_05_0000164 (LandPlants) Phylogenetic Tree(s): OG_05_0000164_tree ,
OG_06_0019534 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00130300
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022141001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 Archaeplastida
GSVIVT01030590001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 Archaeplastida
Gb_25417 No alias metabolite transporter (DTX) 0.02 Archaeplastida
Mp7g12320.1 No alias metabolite transporter (DTX) 0.01 Archaeplastida
Solyc10g007360.4.1 No alias metabolite transporter (DTX) 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA Interproscan
MF GO:0015238 drug transmembrane transporter activity IEA Interproscan
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002528 MATE_fam 9 122
IPR002528 MATE_fam 183 345
No external refs found!