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  5. LOC_Os05g11770.1

LOC_Os05g11770.1


Description : protease (SPF)


Gene families : OG0001011 (Archaeplastida) Phylogenetic Tree(s): OG0001011_tree ,
OG_05_0000935 (LandPlants) Phylogenetic Tree(s): OG_05_0000935_tree ,
OG_06_0006007 (SeedPlants) Phylogenetic Tree(s): OG_06_0006007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g11770.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00238470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AMTR_s00058p00168420 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AT1G09730 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT1G60220 OTS1, ULP1D UB-like protease 1D 0.02 Archaeplastida
Cpa|evm.model.tig00001234.8 No alias Probable ubiquitin-like-specific protease 2A... 0.01 Archaeplastida
GSVIVT01009173001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
Gb_04525 No alias protease (SPF) 0.05 Archaeplastida
MA_10435078g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_708206g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g26300.1 No alias protease (SPF). protease (OTS) 0.04 Archaeplastida
Smo404271 No alias Protein degradation.peptide... 0.04 Archaeplastida
Solyc11g017040.2.1 No alias protease (SPF) 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 313 504
No external refs found!