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  5. LOC_Os05g13520.1

LOC_Os05g13520.1


Description : wax lipid exporter (CER5). subfamily ABCG transporter


Gene families : OG0000249 (Archaeplastida) Phylogenetic Tree(s): OG0000249_tree ,
OG_05_0000904 (LandPlants) Phylogenetic Tree(s): OG_05_0000904_tree ,
OG_06_0005722 (SeedPlants) Phylogenetic Tree(s): OG_06_0005722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g13520.1
Cluster HCCA: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
AT1G17840 ATWBC11, ABCG11,... white-brown complex homolog protein 11 0.06 Archaeplastida
AT1G51460 No alias ABC-2 type transporter family protein 0.03 Archaeplastida
Gb_18403 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.03 Archaeplastida
Gb_21000 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os04g44610.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
MA_69480g0010 No alias suberin/cutin lipid exporter (DSO). wax lipid exporter... 0.03 Archaeplastida
Smo167920 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo234186 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Solyc01g105450.4.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc03g019760.4.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.04 Archaeplastida
Solyc06g072090.3.1 No alias suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.03 Archaeplastida
Solyc06g072100.3.1 No alias ABC transporter G family member 11 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g009100.2.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e007450_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e027165_P003 No alias wax lipid exporter (CER5). subfamily ABCG transporter 0.02 Archaeplastida
Zm00001e033298_P002 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006450 regulation of translational fidelity IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 374 583
IPR003439 ABC_transporter-like 68 210
No external refs found!