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  5. LOC_Os05g16490.1

LOC_Os05g16490.1


Description : no hits & (original description: none)


Gene families : OG0008195 (Archaeplastida) Phylogenetic Tree(s): OG0008195_tree ,
OG_05_0006771 (LandPlants) Phylogenetic Tree(s): OG_05_0006771_tree ,
OG_06_0004302 (SeedPlants) Phylogenetic Tree(s): OG_06_0004302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g16490.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g50020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g21320.1 No alias Mitochondrial outer membrane protein porin 5 OS=Oryza... 0.02 Archaeplastida
LOC_Os02g48940.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g08940.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g23280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g44330.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR021790 DUF3355 57 145
No external refs found!