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  5. LOC_Os05g19370.1

LOC_Os05g19370.1


Description : component RPL15 of LSU proteome component


Gene families : OG0002310 (Archaeplastida) Phylogenetic Tree(s): OG0002310_tree ,
OG_05_0002154 (LandPlants) Phylogenetic Tree(s): OG_05_0002154_tree ,
OG_06_0002413 (SeedPlants) Phylogenetic Tree(s): OG_06_0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g19370.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00023340 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.16 Archaeplastida
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.39 Archaeplastida
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.21 Archaeplastida
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 Archaeplastida
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 Archaeplastida
Gb_32917 No alias component RPL15 of LSU proteome component 0.05 Archaeplastida
Gb_36986 No alias component RPL15 of LSU proteome component 0.21 Archaeplastida
MA_19619g0010 No alias component RPL15 of LSU proteome component 0.04 Archaeplastida
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.27 Archaeplastida
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.41 Archaeplastida
Pp3c14_22920V3.1 No alias Ribosomal protein L23/L15e family protein 0.37 Archaeplastida
Pp3c17_22180V3.1 No alias Ribosomal protein L23/L15e family protein 0.26 Archaeplastida
Pp3c1_37420V3.1 No alias Ribosomal protein L23/L15e family protein 0.3 Archaeplastida
Pp3c20_2640V3.1 No alias Ribosomal protein L23/L15e family protein 0.28 Archaeplastida
Pp3c2_5780V3.1 No alias Ribosomal protein L23/L15e family protein 0.29 Archaeplastida
Pp3c8_22360V3.1 No alias Ribosomal protein L23/L15e family protein 0.34 Archaeplastida
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.22 Archaeplastida
Solyc04g008460.4.1 No alias component RPL15 of LSU proteome component 0.26 Archaeplastida
Solyc06g060400.3.1 No alias component RPL15 of LSU proteome component 0.42 Archaeplastida
Solyc06g064630.3.1 No alias component RPL15 of LSU proteome component 0.36 Archaeplastida
Zm00001e010380_P001 No alias component RPL15 of LSU proteome component 0.44 Archaeplastida
Zm00001e032897_P001 No alias component RPL15 of LSU proteome component 0.41 Archaeplastida
Zm00001e034995_P001 No alias component RPL15 of LSU proteome component 0.4 Archaeplastida
Zm00001e034996_P001 No alias component RPL15 of LSU proteome component 0.41 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!