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  5. LOC_Os05g19970.1

LOC_Os05g19970.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0002063 (Archaeplastida) Phylogenetic Tree(s): OG0002063_tree ,
OG_05_0003368 (LandPlants) Phylogenetic Tree(s): OG_05_0003368_tree ,
OG_06_0003836 (SeedPlants) Phylogenetic Tree(s): OG_06_0003836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g19970.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00184570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01028201001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!