Description : Polygalacturonase At1g48100 OS=Arabidopsis thaliana (sp|q949z1|pglr4_arath : 536.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 197.0)
Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0000636 (LandPlants) Phylogenetic Tree(s): OG_05_0000636_tree ,
OG_06_0002274 (SeedPlants) Phylogenetic Tree(s): OG_06_0002274_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os05g20020.1 | |
Cluster | HCCA: Cluster_235 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00081p00144410 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | Archaeplastida | |
AMTR_s00096p00099360 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.04 | Archaeplastida | |
AMTR_s00096p00105250 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | Archaeplastida | |
AT1G05650 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G23460 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT1G48100 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT1G65570 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT3G26610 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT5G14650 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT5G39910 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01008061001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01008062001 | No alias | Polygalacturonase OS=Juniperus ashei | 0.04 | Archaeplastida | |
GSVIVT01017302001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01017305001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01032118001 | No alias | Cell wall.pectin.modification and... | 0.02 | Archaeplastida | |
GSVIVT01032447001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
GSVIVT01038241001 | No alias | Polygalacturonase OS=Prunus persica | 0.03 | Archaeplastida | |
GSVIVT01038243001 | No alias | Polygalacturonase OS=Prunus persica | 0.03 | Archaeplastida | |
Gb_05788 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | Archaeplastida | |
Gb_27331 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.02 | Archaeplastida | |
Solyc01g087280.2.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Solyc02g067640.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
Solyc04g008230.3.1 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Solyc04g015530.3.1 | No alias | polygalacturonase (QRT2) | 0.02 | Archaeplastida | |
Solyc05g005040.4.1 | No alias | polygalacturonase (PGX1) | 0.03 | Archaeplastida | |
Solyc08g014540.1.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.03 | Archaeplastida | |
Solyc08g014560.3.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.04 | Archaeplastida | |
Solyc12g009420.3.1 | No alias | Polygalacturonase QRT2 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Solyc12g019120.2.1 | No alias | Polygalacturonase OS=Prunus persica... | 0.02 | Archaeplastida | |
Zm00001e017565_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
Zm00001e027720_P001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 122 | 437 |
No external refs found! |