LOC_Os05g20930.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g20930.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00212840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.05 Archaeplastida
AT1G68360 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.04 Archaeplastida
AT2G41940 ZFP8 zinc finger protein 8 0.02 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.05 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.04 Archaeplastida
AT5G27880 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.03 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01035905001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_04808 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os04g36650.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os11g48000.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_113057g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_54742g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c23_960V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c2_32900V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e017009_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e025746_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e030783_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!