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  5. LOC_Os05g23140.1

LOC_Os05g23140.1


Description : Small heat shock protein, chloroplastic OS=Pisum sativum (sp|p09886|hs21c_pea : 84.7)


Gene families : OG0000020 (Archaeplastida) Phylogenetic Tree(s): OG0000020_tree ,
OG_05_0000537 (LandPlants) Phylogenetic Tree(s): OG_05_0000537_tree ,
OG_06_0004121 (SeedPlants) Phylogenetic Tree(s): OG_06_0004121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23140.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Gb_40446 No alias class-M-II small heat-shock-responsive protein 0.02 Archaeplastida
LOC_Os02g48140.1 No alias 17.8 kDa heat shock protein OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os03g15960.1 No alias class-C-I small heat-shock-responsive protein 0.03 Archaeplastida
LOC_Os03g16040.1 No alias class-C-I small heat-shock-responsive protein 0.04 Archaeplastida
MA_1037g0010 No alias 17.5 kDa class I heat shock protein OS=Glycine max... 0.01 Archaeplastida
Mp7g16750.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.01 Archaeplastida
Pp3c11_14810V3.1 No alias heat shock protein 17.6A 0.01 Archaeplastida
Solyc02g080410.3.1 No alias class-C-V small heat-shock-responsive protein 0.02 Archaeplastida
Zm00001e014025_P001 No alias 23.6 kDa heat shock protein, mitochondrial OS=Oryza... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 143 250
No external refs found!