1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g23590.1

LOC_Os05g23590.1


Description : no hits & (original description: none)


Gene families : OG0001639 (Archaeplastida) Phylogenetic Tree(s): OG0001639_tree ,
OG_05_0001054 (LandPlants) Phylogenetic Tree(s): OG_05_0001054_tree ,
OG_06_0000539 (SeedPlants) Phylogenetic Tree(s): OG_06_0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23590.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g16280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g28500.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g17820.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os05g11680.1 No alias no hits & (original description: none) 0.2 Archaeplastida
LOC_Os05g24800.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os05g25130.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g28410.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g20910.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os07g23700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g22024.1 No alias no hits & (original description: none) 0.33 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 208 297
No external refs found!