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  5. LOC_Os05g23670.1

LOC_Os05g23670.1


Description : histone demethylase (PKDM7). transcription factor (JUMONJI)


Gene families : OG0001111 (Archaeplastida) Phylogenetic Tree(s): OG0001111_tree ,
OG_05_0001701 (LandPlants) Phylogenetic Tree(s): OG_05_0001701_tree ,
OG_06_0001587 (SeedPlants) Phylogenetic Tree(s): OG_06_0001587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g23670.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.03 Archaeplastida
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.06 Archaeplastida
Solyc06g008490.3.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 539 590
IPR003888 FYrich_N 772 819
IPR003347 JmjC_dom 318 434
IPR003889 FYrich_C 826 910
IPR003349 JmjN 77 110
No external refs found!