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  5. LOC_Os05g25480.1

LOC_Os05g25480.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001977 (SeedPlants) Phylogenetic Tree(s): OG_06_0001977_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g25480.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AMTR_s00077p00136900 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01030165001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
GSVIVT01037214001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_31304 No alias Mannan endo-1,4-beta-mannosidase 3 OS=Oryza sativa... 0.03 Archaeplastida
MA_10432193g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_110162g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_894609g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c5_5170V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc01g008720.2.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Solyc10g008300.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Zm00001e009260_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029246_P001 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 119 416
No external refs found!