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  5. AMTR_s00006p00245830

AMTR_s00006p00245830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.127

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycoproteins.fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00245830
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.03 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_05461 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
LOC_Os01g62380.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
LOC_Os05g38500.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.02 Archaeplastida
Smo55113 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g091530.4.1 No alias classical arabinogalactan protein. fasciclin-type... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 194 322
IPR000782 FAS1_domain 32 126
No external refs found!