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  5. AMTR_s00006p00245960

AMTR_s00006p00245960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.129

Description : Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana


Gene families : OG0013941 (Archaeplastida) Phylogenetic Tree(s): OG0013941_tree ,
OG_05_0013847 (LandPlants) Phylogenetic Tree(s): OG_05_0013847_tree ,
OG_06_0013742 (SeedPlants) Phylogenetic Tree(s): OG_06_0013742_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00245960
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00205860 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00090p00091440 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g50180... 0.06 Archaeplastida
AMTR_s00651p00011510 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g50180... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 171 242
No external refs found!