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  5. LOC_Os05g27450.1

LOC_Os05g27450.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g27450.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g29710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g34360.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g25590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g26410.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g14000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g21000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g13560.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g15610.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g20450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g33480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g23810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g22910.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005542 folic acid binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0072341 modified amino acid binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 841 943
No external refs found!