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  5. LOC_Os05g29820.1

LOC_Os05g29820.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g29820.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g24300.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g12390.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g19000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16350.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g16540.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g25160.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g11230.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g45670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g10970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g28350.1 No alias no hits & (original description: none) 0.17 Archaeplastida
Zm00001e029348_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!