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  5. LOC_Os05g32070.1

LOC_Os05g32070.1


Description : transcription factor (SRS)


Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g32070.1
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
AT2G21400 SRS3 SHI-related sequence3 0.03 Archaeplastida
AT3G51060 SRS1, STY1 Lateral root primordium (LRP) protein-related 0.04 Archaeplastida
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.06 Archaeplastida
AT5G66350 SHI Lateral root primordium (LRP) protein-related 0.04 Archaeplastida
GSVIVT01009812001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.06 Archaeplastida
GSVIVT01013486001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
GSVIVT01018845001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
GSVIVT01024206001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.05 Archaeplastida
LOC_Os01g72490.1 No alias transcription factor (SRS) 0.05 Archaeplastida
MA_2299g0010 No alias transcription factor (SRS) 0.03 Archaeplastida
Pp3c18_8920V3.1 No alias Lateral root primordium (LRP) protein-related 0.02 Archaeplastida
Solyc02g062400.3.1 No alias transcription factor (SRS) 0.04 Archaeplastida
Solyc02g084680.3.1 No alias transcription factor (SRS) 0.1 Archaeplastida
Solyc04g080970.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc10g054070.1.1 No alias transcription factor (SRS) 0.03 Archaeplastida
Zm00001e010227_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e013256_P002 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e026854_P001 No alias transcription factor (SRS) 0.09 Archaeplastida
Zm00001e028304_P001 No alias transcription factor (SRS) 0.07 Archaeplastida
Zm00001e030189_P001 No alias transcription factor (SRS) 0.09 Archaeplastida
Zm00001e031567_P001 No alias transcription factor (SRS) 0.1 Archaeplastida
Zm00001e034798_P001 No alias transcription factor (SRS) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!