LOC_Os05g32570.1


Description : KEG signal transducer of abscisic acid perception


Gene families : OG0004165 (Archaeplastida) Phylogenetic Tree(s): OG0004165_tree ,
OG_05_0003764 (LandPlants) Phylogenetic Tree(s): OG_05_0003764_tree ,
OG_06_0004948 (SeedPlants) Phylogenetic Tree(s): OG_06_0004948_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g32570.1
Cluster HCCA: Cluster_350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00121070 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00038p00121420 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.perception and... 0.03 Archaeplastida
GSVIVT01036651001 No alias Phytohormones.abscisic acid.perception and... 0.04 Archaeplastida
Gb_32282 No alias E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e031592_P002 No alias KEG signal transducer of abscisic acid perception 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!