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  5. LOC_Os05g32670.1

LOC_Os05g32670.1


Description : Uncharacterized protein At5g19025 OS=Arabidopsis thaliana (sp|p0c8q9|y5902_arath : 122.0)


Gene families : OG0003120 (Archaeplastida) Phylogenetic Tree(s): OG0003120_tree ,
OG_05_0002123 (LandPlants) Phylogenetic Tree(s): OG_05_0002123_tree ,
OG_06_0001730 (SeedPlants) Phylogenetic Tree(s): OG_06_0001730_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g32670.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Zm00001e027203_P001 No alias Uncharacterized protein At5g19025 OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e028875_P001 No alias Uncharacterized protein At5g19025 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e031602_P001 No alias Uncharacterized protein At5g19025 OS=Arabidopsis... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!