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  5. LOC_Os05g33840.1

LOC_Os05g33840.1


Description : 1-deoxy-D-xylulose 5-phosphate synthase (DXS)


Gene families : OG0001673 (Archaeplastida) Phylogenetic Tree(s): OG0001673_tree ,
OG_05_0001462 (LandPlants) Phylogenetic Tree(s): OG_05_0001462_tree ,
OG_06_0002272 (SeedPlants) Phylogenetic Tree(s): OG_06_0002272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g33840.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00123940 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.methylerythritol... 0.03 Archaeplastida
AT4G15560 CLA, DXS, CLA1,... Deoxyxylulose-5-phosphate synthase 0.04 Archaeplastida
Mp2g09130.1 No alias 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.04 Archaeplastida
Pp3c2_27550V3.1 No alias Deoxyxylulose-5-phosphate synthase 0.07 Archaeplastida
Zm00001e031654_P001 No alias 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR033248 Transketolase_C 574 697
IPR005477 Dxylulose-5-P_synthase 73 358
IPR005475 Transketolase-like_Pyr-bd 394 556
No external refs found!