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  5. LOC_Os05g35290.1

LOC_Os05g35290.1


Description : phenylalanine ammonia lyase (PAL)


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35290.1
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.09 Archaeplastida
AMTR_s00024p00202590 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
AMTR_s00148p00088930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
AT2G37040 ATPAL1, PAL1 PHE ammonia lyase 1 0.05 Archaeplastida
AT3G10340 PAL4 phenylalanine ammonia-lyase 4 0.04 Archaeplastida
GSVIVT01006148001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01015124001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01015138001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01015140001 No alias Phenylalanine ammonia-lyase OS=Pinus taeda 0.02 Archaeplastida
GSVIVT01024292001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01024293001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.04 Archaeplastida
GSVIVT01024294001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024295001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01024303001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024305001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01025214001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
GSVIVT01025703001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_21115 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_31408 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os02g41630.2 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
LOC_Os04g43760.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
MA_10429279g0010 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
MA_123220g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_15852g0010 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
MA_5862513g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_632036g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_73113g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp7g14880.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Pp3c10_21810V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.05 Archaeplastida
Pp3c14_11870V3.1 No alias PHE ammonia lyase 1 0.04 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c1_18680V3.1 No alias phenyl alanine ammonia-lyase 3 0.03 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.04 Archaeplastida
Pp3c21_7640V3.1 No alias phenylalanine ammonia-lyase 2 0.03 Archaeplastida
Pp3c21_7680V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c24_13110V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c26_14610V3.1 No alias phenylalanine ammonia-lyase 2 0.02 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c2_32330V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Solyc00g500095.1.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Solyc00g500353.1.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Solyc03g042560.3.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Solyc03g078280.3.1 No alias Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... 0.03 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Solyc09g007910.4.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Solyc09g007920.4.1 No alias phenylalanine ammonia lyase (PAL) 0.05 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e007572_P001 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Zm00001e007573_P001 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Zm00001e015155_P001 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e015156_P001 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Zm00001e015157_P001 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 62 530
No external refs found!