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  5. LOC_Os05g35500.1

LOC_Os05g35500.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.02 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT5G59780 ATMYB59-1,... myb domain protein 59 0.03 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01000232001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01004464001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01007740001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016767001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01031496001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01033648001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g49986.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14452g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14730g0020 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_362115g0010 No alias transcription factor (MYB) 0.08 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093940.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g078420.1.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc11g072060.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e036223_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!