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  5. AMTR_s00006p00256840

AMTR_s00006p00256840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.194

Description : Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana


Gene families : OG0017445 (Archaeplastida) Phylogenetic Tree(s): OG0017445_tree ,
OG_05_0020345 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0036018 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00256840
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009619001 No alias Pentatricopeptide repeat-containing protein At2g15690,... 0.03 Archaeplastida
Smo109758 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 13 37
No external refs found!