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  5. LOC_Os05g36920.1

LOC_Os05g36920.1


Description : class-II histone deacetylase


Gene families : OG0005493 (Archaeplastida) Phylogenetic Tree(s): OG0005493_tree ,
OG_05_0006884 (LandPlants) Phylogenetic Tree(s): OG_05_0006884_tree ,
OG_06_0008491 (SeedPlants) Phylogenetic Tree(s): OG_06_0008491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g36920.1
Cluster HCCA: Cluster_332


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 213 503
No external refs found!