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  5. LOC_Os05g37730.1

LOC_Os05g37730.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g37730.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00247840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00029p00215750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G70000 No alias myb-like transcription factor family protein 0.04 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.03 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_11171 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os04g27410.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37060.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_10433265g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_908g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Smo133546 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc11g071500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e020381_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025446_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 38 82
IPR001005 SANT/Myb 152 196
No external refs found!