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  5. LOC_Os05g38250.1

LOC_Os05g38250.1


Description : CASP-like protein 5B2 OS=Oryza sativa subsp. japonica (sp|q0dhm7|cspls_orysj : 252.0)


Gene families : OG0000968 (Archaeplastida) Phylogenetic Tree(s): OG0000968_tree ,
OG_05_0001200 (LandPlants) Phylogenetic Tree(s): OG_05_0001200_tree ,
OG_06_0003254 (SeedPlants) Phylogenetic Tree(s): OG_06_0003254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38250.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
AT2G28370 No alias Uncharacterised protein family (UPF0497) 0.02 Archaeplastida
AT3G53850 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
Smo76503 No alias CASP-like protein 5A2 OS=Ginkgo biloba 0.01 Archaeplastida
Zm00001e026916_P001 No alias CASP-like protein 5B2 OS=Zea mays (sp|b6tax2|cspln_maize : 237.0) 0.03 Archaeplastida
Zm00001e033651_P001 No alias CASP-like protein 5B3 OS=Zea mays (sp|b6t990|cspli_maize : 244.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 8 140
No external refs found!