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  5. LOC_Os05g38600.1

LOC_Os05g38600.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38600.1
Cluster HCCA: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00194870 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00102p00073930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.02 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.02 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.02 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_01024 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_119483g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_584554g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g005180.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!