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  5. LOC_Os05g38790.1

LOC_Os05g38790.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0002295 (SeedPlants) Phylogenetic Tree(s): OG_06_0002295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38790.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00107810 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00109p00027450 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.03 Archaeplastida
AT2G26410 Iqd4 IQ-domain 4 0.08 Archaeplastida
AT4G10640 IQD16 IQ-domain 16 0.02 Archaeplastida
AT5G03040 iqd2 IQ-domain 2 0.03 Archaeplastida
Gb_20874 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.02 Archaeplastida
Gb_36296 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g51230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10430422g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp8g06010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c22_12150V3.1 No alias IQ-domain 6 0.02 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c2_3650V3.1 No alias IQ-domain 6 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Smo438938 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc02g083285.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g083100.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g084280.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031848_P002 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.12 Archaeplastida
Zm00001e037612_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!