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  5. LOC_Os05g38800.2

LOC_Os05g38800.2


Description : no hits & (original description: none)


Gene families : OG0000897 (Archaeplastida) Phylogenetic Tree(s): OG0000897_tree ,
OG_05_0001976 (LandPlants) Phylogenetic Tree(s): OG_05_0001976_tree ,
OG_06_0002181 (SeedPlants) Phylogenetic Tree(s): OG_06_0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38800.2
Cluster HCCA: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
AT3G54760 No alias dentin sialophosphoprotein-related 0.02 Archaeplastida
Cpa|evm.model.tig00020903.39 No alias No description available 0.01 Archaeplastida
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_11632 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis... 0.02 Archaeplastida
MA_10197194g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027258_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e028244_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031849_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000313 PWWP_dom 166 253
No external refs found!