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  5. LOC_Os05g39590.3

LOC_Os05g39590.3


Description : Dehydration-responsive element-binding protein 2D OS=Oryza sativa subsp. japonica (sp|q65wx1|dre2d_orysj : 253.0)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39590.3
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.03 Archaeplastida
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.04 Archaeplastida
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 Archaeplastida
GSVIVT01002262001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01017315001 No alias Cell wall.cutin and suberin.biosynthesis... 0.04 Archaeplastida
GSVIVT01021098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01028313001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.03 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g41760.1 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.04 Archaeplastida
MA_10430769g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10432800g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_108992g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_16778g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_33394g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_45733g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_5280013g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_6677438g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_7960347g0010 No alias transcription factor (ERF) 0.07 Archaeplastida
MA_83118g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_88g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Mp6g04880.1 No alias Ethylene-responsive transcription factor ERF008... 0.02 Archaeplastida
Mp7g00860.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.02 Archaeplastida
Pp3c27_1350V3.1 No alias ERF domain protein 12 0.03 Archaeplastida
Pp3c4_2660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c4_2680V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e016421_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e025840_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e033541_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e036201_P001 No alias Ethylene-responsive transcription factor ERF014... 0.03 Archaeplastida
Zm00001e041532_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e041815_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 67 114
No external refs found!