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  5. AMTR_s00006p00260920

AMTR_s00006p00260920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.225

No description available


Gene families : OG0005266 (Archaeplastida) Phylogenetic Tree(s): OG0005266_tree ,
OG_05_0003794 (LandPlants) Phylogenetic Tree(s): OG_05_0003794_tree ,
OG_06_0003670 (SeedPlants) Phylogenetic Tree(s): OG_06_0003670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00260920
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
AT3G18310 No alias unknown protein; Has 30 Blast hits to 30 proteins in 10... 0.05 Archaeplastida
Mp3g25170.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Neighborhood
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Neighborhood
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018202 peptidyl-histidine modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070403 NAD+ binding IEP Neighborhood
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
BP GO:2000765 regulation of cytoplasmic translation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!