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  5. LOC_Os05g39950.1

LOC_Os05g39950.1


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39950.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00189070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
AMTR_s00109p00026640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.03 Archaeplastida
AT4G04025 No alias No description available 0.03 Archaeplastida
AT4G18830 ATOFP5, OFP5 ovate family protein 5 0.03 Archaeplastida
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.03 Archaeplastida
GSVIVT01017984001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
Gb_13493 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os07g48150.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os12g06150.1 No alias transcription factor (OFP) 0.03 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.03 Archaeplastida
  • MA_61037g0010
    		•  No alias transcription factor (OFP) 0.02 Archaeplastida
    Solyc09g082080.1.1 No alias transcription factor (OFP) 0.02 Archaeplastida
    Solyc11g006670.1.1 No alias transcription factor (OFP) 0.03 Archaeplastida
    Zm00001e000448_P001 No alias transcription factor (OFP) 0.06 Archaeplastida
    Zm00001e007176_P001 No alias transcription factor (OFP) 0.05 Archaeplastida
    Zm00001e008181_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
    Zm00001e016408_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
    Zm00001e020414_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
    Zm00001e025928_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
    Zm00001e031917_P001 No alias transcription factor (OFP) 0.05 Archaeplastida

    Type GO Term Name Evidence Source
    MF GO:0003677 DNA binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
    MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
    MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
    BP GO:0006541 glutamine metabolic process IEP Neighborhood
    BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
    BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
    BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
    BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
    MF GO:0016211 ammonia ligase activity IEP Neighborhood
    MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
    MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
    MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
    MF GO:0061134 peptidase regulator activity IEP Neighborhood
    MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
    BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
    BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
    InterPro domains Description Start Stop
    IPR025830 DNA_bnd_dom_ovate 89 128
    IPR006458 Ovate_C 408 464
    No external refs found!