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  5. LOC_Os05g40160.1

LOC_Os05g40160.1


Description : no description available(sp|f7j0m6|rga4s_orysj : 556.0)


Gene families : OG0008947 (Archaeplastida) Phylogenetic Tree(s): OG0008947_tree ,
OG_05_0008663 (LandPlants) Phylogenetic Tree(s): OG_05_0008663_tree ,
OG_06_0005650 (SeedPlants) Phylogenetic Tree(s): OG_06_0005650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g40160.1
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g22510.1 No alias no description available(sp|f7j0m6|rga4s_orysj : 494.0) 0.02 Archaeplastida
LOC_Os11g45790.1 No alias no description available(sp|f7j0m6|rga4s_orysj : 575.0) 0.03 Archaeplastida
LOC_Os11g45930.1 No alias no description available(sp|f7j0m4|rga4r_orysj : 455.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 192 433
No external refs found!