1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g41060.1

LOC_Os05g41060.1


Description : ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g41060.1
Cluster HCCA: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00204p00014880 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.03 Archaeplastida
Cpa|evm.model.tig00001093.2 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Cre02.g142687 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
GSVIVT01024420001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
LOC_Os02g47110.2 No alias ARF-GTPase 0.03 Archaeplastida
MA_4349g0020 No alias ARF-GTPase 0.02 Archaeplastida
Mp2g11170.1 No alias ARF-GTPase 0.03 Archaeplastida
Mp3g13920.1 No alias ARF-GTPase 0.02 Archaeplastida
Mp7g13050.1 No alias ARF-GTPase 0.02 Archaeplastida
Solyc01g008000.3.1 No alias ARF-GTPase 0.1 Archaeplastida
Zm00001e011790_P001 No alias ARF-GTPase 0.03 Archaeplastida
Zm00001e019488_P002 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e031984_P002 No alias ARF-GTPase 0.04 Archaeplastida
Zm00001e033127_P003 No alias ARF-GTPase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004779 sulfate adenylyltransferase activity IEP Neighborhood
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!