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  5. LOC_Os05g41490.1

LOC_Os05g41490.1


Description : component EDL of SCF E3 ubiquitin ligase complex


Gene families : OG0003185 (Archaeplastida) Phylogenetic Tree(s): OG0003185_tree ,
OG_05_0002156 (LandPlants) Phylogenetic Tree(s): OG_05_0002156_tree ,
OG_06_0001612 (SeedPlants) Phylogenetic Tree(s): OG_06_0001612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g41490.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT3G63060 EDL3 EID1-like 3 0.06 Archaeplastida
GSVIVT01011098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Gb_29590 No alias component EDL of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Solyc06g084320.1.1 No alias component EDL of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Zm00001e027333_P001 No alias component EDL of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 42 81
No external refs found!