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  5. LOC_Os05g42180.1

LOC_Os05g42180.1


Description : transcription factor (bHLH)


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g42180.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00029p00092220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AT1G27660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G29100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Gb_06063 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_33415 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Smo117274 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g150101.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g031450.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc06g066580.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e010350_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e014179_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e016395_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e025623_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e027157_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e031298_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e032055_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!